* = equal contribution; ** = corresponding author(s); Bold Names = Dantas Lab Authors

Spatiotemporal dynamics of multidrug resistant bacteria on intensive care unit surfaces.
D'Souza AW*, Potter RF*, Wallace M, Shupe A, Patel S, Sun X, Gul D, Kwon JH, Andleeb S**, Burnham CD**, Dantas G**.
Nature Communications 2019; doi:10.1038/s41467-019-12563-1 | [PDF] [supplementary material]

Complex interactions between the microbiome and cancer immune therapy.
Schwartz DJ*, Rebeck ON*, Dantas G**.
Critical Reviews in Clinical Laboratory Sciences 2019; doi:10.1080/10408363.2019.1660303 | [PDF]

Persistent metagenomic signatures of early-life hospitalization and antibiotic treatment in the infant gut microbiota and resistome.
Gasparrini AJ, Wang B, Sun X, Kennedy EA, Hernandez-Leyva A, Ndao IM, Tarr PI, Warner BB & Dantas G**.
Nature Microbiology 2019; doi:10.1038/s41564-019-0550-2 | [PDF] [supplementary material]

In Silico Analysis of Gardnerella Genomospecies Detected in the Setting of Bacterial Vaginosis.
Potter RF, Burnham CD, Dantas G**.
Clinical Chemistry 2019; doi:10.1373/clinchem.2019.305474 | [PDF]

Comparative Genomics of Antibiotic-Resistant Uropathogens Implicates Three Routes for Recurrence of Urinary Tract Infections.
Thänert R, Reske KA, Hink T, Wallace MA, Wang B, Schwartz DJ, Seiler S, Cass C, Burnham CA, Dubberke ER**, Kwon JH**, Dantas G**.
mBio 2019; doi:10.1128/mBio.01977-19 | [PDF]

Phenotypic and genotypic characterization of linezolid-resistant Enterococcus faecium from the USA and Pakistan
Wardenburg KE*, Potter RF*, D'Souza AW, Hussain T, Wallace MA, Andleeb S, Burnham CD, Dantas G**.
Journal of Antimicrobial Chemotherapy 2019; doi:10.1093/jac/dkz367 | [PDF]

Bogotá River anthropogenic contamination alters microbial communities and promotes spread of antibiotic resistance genes.
Posada-Perlaza CE, Ramírez-Rojas A, Porras P, Adu-Oppong B, Botero-Coy AM, Hernández F, Anzola JM, Díaz L, Dantas G, Reyes A**, Zambrano MM**.
Scientific Reports 2019; doi:10.1038/s41598-019-48200-6 | [PDF]

Development of Rhodococcus opacus as a chassis for lignin valorization and bioproduction of high-value compounds.
Anthony WE*, Carr RR*, DeLorenzo DM, Campbell T, Shang Z, Foston M, Moon TS**, Dantas G**.
Biotechnol Biofuels 2019; doi:10.1186/s13068-019-1535-3 | [PDF]

Genotypic and phenotypic characterization of antimicrobial resistance in Neisseria gonorrhoeae: a cross-sectional study of isolates recovered from routine urine cultures in a high-incidence setting.
Bailey AL*, Potter RF*, Wallace MA, Johnson C, Dantas G**, Burnham CA**.
mSphere 2019; doi:10.1128/mSphere.00373-19 | [PDF]

A concerted systems biology analysis of phenol metabolism in Rhodococcus opacus PD630.
Roell GW, Carr RR, Campbell T, Shang Z, Henson WR, Czajka JJ, Martín HG, Zhang F, Foston M, Dantas G, Moon TS**, Tang YJ**.
Metabolic Engineering 2019; doi:10.1016/j.ymben.2019.06.013 | [PDF]

Genomic and metagenomic approaches for predictive surveillance of emerging pathogens and antibiotic resistance.
Sukhum KV*, Diorio-Toth L*, Dantas G**.
Clinical Pharmacology & Therapeutics 2019; doi:10.1002/cpt.1535 | [PDF]

Urinary tract colonization is enhanced by a plasmid that regulates uropathogenic Acinetobacter baumannii chromosomal genes.
Di Venanzio G, Flores-Mireles AL, Calix JJ, Haurat MF, Scott NE, Palmer LD, Potter RF, Hibbing ME, Friedman L, Wang B, Dantas G, Skaar EP, Hultgren SJ, Feldman MF**.
Nature Communications 2019; doi:10.1038/s41467-019-10706-y | [PDF]

Draft genome sequence of a blaNDM-1- and blaPME-1-harboring Pseudomonas aeruginosa clinical isolate from Pakistan.
Irum S, Potter RF, Kamran R, Mustafa Z, Wallace MA, Burnham C-AD, Dantas G, Andleeb S**.
Microbiology Resource Announcements 2019; doi:10.1128/MRA.00107-19 | [PDF]

Adaptive Strategies of the Candidate Probiotic E. coli Nissle in the Mammalian Gut
Crook N*, Ferreiro A*, Gasparrini AJ, Pesesky MW, Gibson MK, Wang B, Sun X, Condiotte Z, Dobrowolski S, Peterson D, Dantas G**
Cell Host & Microbe 2019; doi:10.1016/j.chom.2019.02.005 | [PDF]

Sequencing-based methods and resources to study antimicrobial resistance
Boolchandani M*, D’Souza AW*, Dantas G**.
Nature Reviews Genetics 2019; doi:10.1038/s41576-019-0108-4 | [PDF]

Semisynthetic Analogues of Anhydrotetracycline as Inhibitors of Tetracycline Destructase Enzymes
Markley JL, Fang L, Gasparrini AJ, Symister CT, Kumar H, Tolia NH**, Dantas G**, and Wencewicz TA**
ACS infectious diseases. 2019; doi10.1021/acsinfecdis.8b00349 | [PDF] [supplementary material]

Discovery and Characterization of a Nitroreductase Capable of Conferring Bacterial Resistance to Chloramphenicol
Crofts TS**, Sontha P, King AO, Wang B, Biddy BA, Zanolli N, Gaumnitz J, Dantas G**.
Cell Chemical Biology 2019; doi: 10.1016/j.chembiol.2019.01.007 | [PDF] [supplementary material]

Insights into How Probiotics Colonize the Healthy Human Gut
Ferreiro A, Dantas G, Ciorba MA.
Gastroenterology 2019; doi: 10.1053/j.gastro.2019.01.022 | [PDF]

Multidrug-resistant plasmids repress chromosomally encoded T6SS to enable their dissemination.
Di Venanzio G, Moon KH, Weber BS, Lopez J, Ly PM, Potter RF, Dantas G, Feldman MF**.
PNAS 2019; doi: 10.1073/pnas.1812557116 | [PDF] [supplementary material]

Lipid metabolism of phenol-tolerant Rhodococcus opacus strains for lignin bioconversion.
Henson WR, Hsu FF, Dantas G, Moon TS**, Foston M**.
Biotechnol Biofuels 2018; doi: 10.1186/s13068-018-1337-z | [PDF]

Population Structure, Antibiotic Resistance, and Uropathogenicity of Klebsiella variicola.
Potter RF, Lainhart W, Twentyman J, Wallace MA, Wang B, Burnham CA**, Rosen DA**, Dantas G**.
mBio 2018; doi: 10.1128/mBio.02481-18 | [PDF] [supplementary material]

Impact of Amoxicillin-Clavulanate followed by Autologous Fecal Microbiota Transplantation on Fecal Microbiome Structure and Metabolic Potential.
Bulow C, Langdon A, Hink T, Wallace M, Reske KA, Patel S, Sun X, Seiler S, Jones S, Kwon JH, Burnham CA, Dantas G**, Dubberke ER**.
mSphere 2018; doi: 10.1128/mSphereDirect.00588-18 | [PDF]

Infant diet and maternal gestational weight gain predict early metabolic maturation of gut microbiomes.
Baumann-Dudenhoeffer AM**, D'Souza AW, Tarr PI, Warner BB, Dantas G**.
Nature Medicine 2018; doi: 10.1038/s41591-018-0216-2 | [PDF] [supplementary material]

Local confinement of disease-related microbiome facilitates recovery of gorgonian sea fans from necrotic-patch disease
Quintanilla E**, Ramírez-Portilla C, Adu-Oppong B, Walljasper G, Glaeser SP, Wilke T, Muñoz AR, Sánchez JA
Scientific reports8(1), p.14636; doi: 10.1038/s41598-018-33007-8 | [PDF]

Mechanism of high-level daptomycin resistance in Corynebacterium striatum.
Goldner NK*, Bulow C*, Cho K, Wallace M, Hsu F-F, Patti GJ, Burnham CA, Schlesinger P, Dantas G**.
mSphere 2018; doi: 10.1128/mSphereDirect.00371-18 | [PDF]

Multi-omic elucidation of aromatic catabolism in adaptively evolved Rhodococcus opacus.
Henson WR*, Campbell T*, DeLorenzo D, Gao Y, Berla B, Kim SJ, Foston M, Moon TS**, Dantas G**.
Metabolic Engineering 2018; doi: 10.1016/j.ymben.2018.06.009 | [PDF]

Superficieibacter electus gen. nov., sp. nov., an Extended-Spectrum β-Lactamase Possessing Member of the Enterobacteriaceae Family, Isolated From Intensive Care Unit Surfaces.
Potter RF*, D'Souza AW*, Wallace MA, Shupe A, Patel S, Gul D, Kwon JH, Beatty W, Andleeb S, Burnham CD**, Dantas G**
Frontiers in Microbiology 2018; doi: 10.3389/fmicb.2018.01629 | [PDF]

Characterization of wild and captive baboon gut microbiota and their antibiotic resistomes.
Tsukayama P*, Boolchandani M*, Patel S, Pehrsson EC, Gibson MK, Chiou KL, Jolly CJ, Rogers J, Phillips-Conroy JE, Dantas G**.
mSystems 2018; | [PDF]

Close Encounters of Three Kinds: Bacteriophages, Commensal Bacteria, and Host Immunity
Keen E**, Dantas G**.
Trends in Microbiology 2018; | [PDF]

Shared strategies for β-lactam catabolism in the soil microbiome
Crofts TS, Wang B, Spivak A, Gianoulis TA, Forsberg KJ, Gibson MK, Johnsky LA, Broomall SM, Rosenzweig CN, Skowronski EW, Gibbons HS, Sommer MOA, Dantas G**.
Nature Chemical Biology 2018; | [PDF] [supplementary material]

Checkpoint Checkmate: Microbiota Modulation of Cancer Immunotherapy
Keen E*, Crofts T*, Dantas G**.
Clinical Chemistry 2018; doi/10.1373/clinchem.2017.286229 | [PDF]

Multiscale Evolutionary Dynamics of Host-Associated Microbiomes
Ferreiro A*, Crook N*, Gasparrini AJ*, Dantas G**.
Cell 2018; | [PDF]

blaIMP-27 on transferable plasmids in Proteus mirabilis and Providencia rettgeri.
Potter RF, Wallace MA, McMullen AR, Prusa J, Stallings CL, Burnham CD**, Dantas G**.
Clinical Microbiology and Infection 2018; | [PDF]

Holobiont Diversity in a Reef-Building Coral over Its Entire Depth Range in the Mesophotic Zone
Gonzalez-Zapata FL, Bongaerts P, Ramírez-Portilla C, Adu-Oppong B, Walljasper G, Reyes A, Sanchez JA**.
Frontiers in Marine Science 2018; | [PDF]

Draft Genome Sequence of the Naturally Competent Bacillus simplex Strain WY10
Keen EC**, Bliskovsky VV, Adhya SL, Dantas G.
Genome Announcements 2017; | [PDF]

Draft Genome Sequence of a Salmonella enterica Serovar Typhi Strain Resistant to Fourth-Generation Cephalosporin and Fluoroquinolone Antibiotics.
Gul D, Potter RF, Riaz H, Ashraf ST, Wallace MA, Munir T, Ali A, Burnham CD, Dantas G, Andleeb S**.
Genome Announcements 2017; doi:10.1128/genomeA.00850-17 | [PDF]

Structural and Functional Survey of Environmental Aminoglycoside Acetyltransferases Reveals Functionality of Resistance Enzymes.
Xu Z, Stogios PJ, Quaile AT, Forsberg KJ, Patel S, Skarina T, Houliston S, Arrowsmith C, Dantas G, and Savchenko A**.
ACS Infectious Diseases 2017; doi: 10.1021/acsinfecdis.7b00068 | [PDF] [supplementary material]

Draft Genome Sequences of Three beta-Lactam-Catabolizing Soil Proteobacteria.
Crofts TS**, Wang B, Spivak A, Gianoulis TA, Forsberg KJ, Gibson MK, Johnsky LA, Broomall SM, Rosenzweig CN, Skowronski EW, Gibbons HS, Sommer MOA, Dantas G.
Genome Announcements 2017; doi:10.1128/genomeA.00653-17 | [PDF]

Draft Genome Sequence of the blaOXA-436- and blaNDM-1-Harboring Shewanella putrefaciens SA70 Isolate.
Potter RF*, D’Souza AW*, Wallace MA, Shupe A, Patel S, Gul D, Kwon JH, Andleeb S, Burnham CD**, Dantas G**.
Genome Announcements 2017; doi:10.1128/genomeA.00644-17 | [PDF]

Plasticity, dynamics, and inhibition of emerging tetracycline-resistance enzymes.
Park J*, Gasparrini AJ*, Reck M, Symister C, Elliott J, Vogel J,  Wencewicz T**, Dantas G**, Tolia N**.
Nature Chemical Biology 2017; doi: 10.1038/nchembio.2376 | [PDF] [supplementary material]

Next-generation approaches to understand and combat the antibiotic resistome.
Crofts T*, Gasparrini AJ*, and Dantas G**.
Nature Reviews Microbiology 2017; doi: 10.1038/nrmicro.2017.28 | [PDF]

Evaluation of Machine Learning and Rules-Based Approaches for Predicting Antimicrobial Resistance Profiles in Gram-negative Bacilli from Whole Genome Sequence Data.
Pesesky MW, Hussain T, Wallace M, Patel S, Andleeb S, Burnham CD**, and Dantas G**.
Frontiers in Microbiology. 2016; 10.3389/fmicb.2016.01887 | [PDF]

Functional Metagenomics to Study Antibiotic Resistance.
Boolchandani M*, Patel S*, Dantas G**.
Chapter in “Antibiotics: Methods and Protocols”, Methods in Molecular Biology. Ed.
Peter Sass. New York: Springer, 2016: 1520:307-329. 10.1007/978-1-4939-6634-9_19 | [PDF]

Genomic and functional techniques to mine the microbiome for novel antimicrobials and antimicrobial resistance genes.
Adu-Oppong B*, Gasparrini AJ*, Dantas G**.
Annals of the New York Academy of Sciences. 2016; 10.1111/nyas.13257 | [PDF]

Contextual organismality: beyond pattern to process in the emergence of organisms.
Díaz-Muñoz SL**, Boddy A, Dantas G, Waters CM, Bronstein JL.
Evolution 2016; 10.1111/evo.13078 | [PDF]

The rapid spread of carbapenem-resistant Enterobacteriaceae.
Potter RF*, D'Souza AW*, Dantas G**.
Drug Resistance Updates 2016; 10.1016/j.drup.2016.09.002 | [PDF]

Antibiotic perturbation of the preterm infant gut microbiome and resistome.
Gasparrini AJ*, Crofts TS*, Gibson MK, Tarr PI, Warner BB, Dantas G**.
Gut Microbes 2016; 10.1080/19490976.2016.1218584 | [PDF]

Transcriptomic analysis illuminates genes involved in chlorophyll synthesis after nitrogen starvation in Acaryochloris sp. CCMEE 5410.
Yoneda A, Wittmann BJ, King JD, Blankenship RE, Dantas G**.
Photosynthesis Research 2016; 10.1007/s11120-016-0279-1 | [PDF] [supplementary material 1] [supplementary material 2]

Interconnected microbiomes and resistomes in low-income human habitats.
Pehrsson EC*, Tsukayama P*, Patel S, Mejía-Bautista M, Sosa-Soto G, Navarrete KM, Calderon M, Cabrera L, Hoyos-Arango W, Teresita Bertoli M, Berg DE, Gilman RH, Dantas G**.
Nature. 2016; 10.1038/nature17672 | [PDF] [supplementary material 1] [ supplementary material 2]

The effects of antibiotics on the microbiome throughout development and alternative approaches for therapeutic modulation.
Langdon A*, Crook N*, Dantas G**.
Genome Medicine. 2016; 10.1186/s13073-016-0294-z | [PDF]

Developmental dynamics of the preterm infant gut microbiota and antibiotic resistome.
Gibson MKWang B, Ahmadi S, Burnham CD, Tarr P, Warner B, Dantas G**.
Nature Microbiology. 2016 |  [PDF] [supplementary material 1] [supplementary material 2] [supplementary material 3] [supplementary material 4]

Comparative transcriptomics elucidates adaptive phenol tolerance in lipid-accumulating Rhodococcus opacus PD630.
Yoneda A*, Henson WR*, Goldner NK, Park KJ, Forsberg KJ, Kim SJ, Pesesky MW, Foston M, Dantas G**, Moon TS**.
Nucleic Acids Research. 2016; 10.1093/nar/gkw055| [PDF] [supplementary material 1] [supplementary material 2]

Simulating Serial-Target Antibacterial Drug Synergies Using Flux Balance Analysis.
Krueger A,* Munck C,* Dantas G, Church G, Galagan J, Lehár J,** Sommer MOA.**
PLOS ONE. 2016; 11(1): e0147651  | [PDF]

Identification of genes conferring tolerance to lignocellulose-derived inhibitors by functional selections in soil metagenomes.
Forsberg KJ, Patel S, Witt E, Wang B, Ellison TD, Dantas G**.
Applied and Environmental Microbiology. 2015; 82(2):528-3 | [PDF] [supplementary material]

High-specificity targeted functional profiling in microbial communities with ShortBRED.
Kaminski J*, Gibson MK*, Franzosa EA, Segata N, Dantas G,** Huttenhower C.**
PLOS Computational Biology. 2015; 82(2):528-3 | [PDF] [supplementary material]

Synergistic, collaterally sensitive β-lactam combinations suppress resistance in MRSA
Gonzales PR, Pesesky MW, Bouley R, Ballard A, Biddy B, Suckow M, Wolter WR, Schroeder VA, Burnham CD, Mobashery S, Chang M, Dantas G.**
Nature Chemical Biology. 2015; 11(11):855-61 | [PDF] [supplementary material]

Antibiotics and the developing infant gut microbiota and resistome
Gibson MK,* Crofts T,* Dantas G.**
Current Opinion in Microbiology. 2015; 27:51-  | [PDF] 

Gut resistome development in healthy twin pairs in the first year of life
Moore AAhmadi S, Patel S, Gibson MKWang B, Ndao M, Deych E, Shannon W, Tarr P, Warner B, Dantas G.**
Microbiome. 2015; 3:29 | [PDF] [supplementary materials]

The Tetracycline Destructases: A Novel Family of Tetracycline-Inactivating Enzymes
Forsberg K, Patel S, Wencewicz T,** Dantas G.**
Chemistry & Biology. 2015; 22:1-10 | [PDF] [supplementary materials]

The microbiome of uncontacted Amerindians
Clemente J,* Pehrsson E,* Blaser M, Sandhu K, Gao Z, Wang B, Magris M, Hidalgo G, Contreras M, Noya-Alarcón O, Lander O, Donald J, Cox M, Water J, Oh P, Ruiz J, Rodriguez S, Shen N, Song S, Metcalf J, Knight R, Dantas G, Dominguez-Bello M.**
Science Advances. 2015; 1(3):e1500183 | [PDF] [supplementary materials]

Functional Characterization of Bacteria Isolated from Ancient Arctic Soil Exposes Diverse Resistance Mechanisms to Modern Antibiotics
Perron GG, Lyle Whyte, Turnbaugh PJ, Goordial J, Hanage WP, Dantas G, Desai M.**
PLOS ONE 2015; 10 (3): e0069533 | [PDF] [supplemental material]

KPC and NDM-1 Genes in Related Enterobacteriaceae Strains and Plasmids from Pakistan and the United States
Pesesky MW,* Hussain T,* Wallace M, Wang B, Andleeb S, Burnham CD, Dantas G.**
Emerging Infectious Diseases. 2015; 21 (6) [PDF] [supplementary materials]

Improved Annotation of Antibiotic Resistance Reveals Microbial Communities Cluster by Ecology
Gibson MKForsberg KJDantas G.**
The ISME Journal. 2015; 9:207 | [PDF[supplementary materials]

Longitudinal Analysis of Microbial Interaction Between Humans and the Indoor Environment
Lax S, Smith DP, Hampton-Marcell J, Owens SM, Handley KM, Scott NM, Gibbson SM, Larsen P, Shogan BD, Weiss S, Metcalf JL, Ursell LK, Vazquez-Baeza Y, Van Treuren W, Hasan NA, Gibson MK, Colwell R, Dantas G, Knight R, Gilbert JA.**
Science. 2014; 345(6200):1048 | [PDF] [supplementary materials] 

The Yin and Yang of Bacterial Resilience in the Human Gut Microbiota
Gibson MK*Pesesky MW*Dantas G.**
J Mol Biol. 2014; 426: 3866 | [PDF] 

Bacterial Phylogeny Structures Soil Resistomes Across Habitats
Forsberg KJ*Patel S*Gibson MK, Lauber CL, Knight R, Fierer N, Dantas G.**
Nature. 2014 ; 509 (7502): 612| [PDF] [supplementary materials]

How to Fight Back Against Antibiotic Resistance
Dantas G,** Sommer MOA.
American Scientist. 2014; Volume 103 | [PDF]

Pediatric Fecal Microbiota Harbor Diverse and Novel Antibiotic Resistance Genes
Moore AMPatel SForsberg KJWang BBentley G, Razia Y, Qin X, Tarr PI, Dantas G.**
PLOS ONE. 2013; 8 (11): e78822 | [PDF] [supplementary materials]

Experimental Approaches for Defining Functional Roles of Microbes in the Human Gut
Dantas G, Sommer MOA, Degnan PH, Goodman AL.**
Annu Rev Microbiol. 2013; 67: 459 | [PDF] 

Novel Resistance Functions Uncovered Using Functional Metagenomic Investigations of Resistance Reservoirs
Pehrsson EC, Forsberg KJ, Gibson MK, Ahmadi S and Dantas G.**
Front Microbiol. 2013; 4: 145 | [PDF] 

Ecological and Clinical Consequences of Antibiotic Subsistence by Environmental Microbes
Dantas G,** Sommer MOA.**
Chapter in Antimicrobial Resistance in the Environment, Eds. Montforts M. & Keen P. 2012
John Wiley & Sons, Inc., Hoboken, NJ, USA. doi: 10.1002/9781118156247.ch4

The Shared Antibiotic Resistome of Soil Bacteria and Human Pathogens
Forsberg KJ*, Reyes A*, Wang B, Selleck EM, Sommer MOA,** Dantas G.**
Science. 2012; 337 (6097): 1107 | [PDF] [supplementary materials]

Context Matters - The Complex Interplay Between Resistome Genotypes and Resistance Phenotypes
Dantas G,** Sommer MOA.**
Curr Op Microbiol. 2012; 15: 577 | [PDF] 

Tackling Antibiotic Resistance
Bush K, Courvalin P, Dantas G, Davies J,** Eisenstein B, Huovinen P, Jacoby GA, Kishony R, Kreiswirth BN, Kutter E, Lerner SA, Levy S, Lewis K, Lomovskaya O, Miller JH, Mobashery S, Piddock LJV, Projan S, Thomas CM, Tomasz A, Tulkens PM, Walsh TR, Watson JD, Witkowski J, Witte W, Wright G, Yeh P, Zgurskaya HI.
Nat Rev Microbiol. 2011; 9 (12): 894 | [PDF]

Functional Metagenomic Investigations of the Human Intestinal Microbiota
Moore AM,* Munck C*, Sommer MOA,** Dantas G.**
Front Microbiol. 2011; 2: 1 | [PDF]

Antibiotics and the Resistant Microbiome
Sommer MOA, Dantas G.
Curr Op Microbiol. 2011; 14 (5): 556 | [PDF]

Extensive Personal Human Gut Microbiota Culture Collections Characterized and Manipulated in Gnotobiotic Mice
Goodman AL, Kallstrom G, Faith JJ, Reyes A, Moore ADantas G, Gordon JI.**
Proc Natl Acad Sci. 2011; 108 (15): 6252 | [PDF] [supplementary materials]

The Human Microbiome Harbors a Diverse Reservoir of Antibiotic Resistance Genes
Sommer MOA,** Church GM, Dantas G.
Virulence. 2010; 1 (4): 299 | [PDF]

A Functional Metagenomic Approach for Expanding the Synthetic Biology Toolbox for Biomass Conversion
Sommer MOA,** Church GM & Dantas G.**
Mol Sys Biol. 2010; 6 (360): 1 | [PDF] [supplementary materials]

Functional Characterization of the Antibiotic Resistance Reservoir in the Human Microflora
Sommer MOA,** Dantas G,** Church GM.
Science. 2009; 325 (5944): 1128 | [PDF] [supplementary materials]

Bacteria Subsisting on Antibiotics
Dantas G*, Sommer MOA*, Oluwasegun RD, Church GM.**
Science; 2008. 320 (5872): 100 | [PDF] [supplementary materials]

High-Resolution Structural and Thermodynamic Analysis of Extreme Stabilization of Human Procarboxypeptidase by Computational Protein Design
Dantas G, Corrent C, Reichow SL, Havranek JJ, Eletr ZM, Isern NG, Kuhlman B, Varani G, Merritt EA, Baker D.**
J Mol Biol. 2006; 366 (4): 1209 | [PDF]

Mistranslation of a Computationally Designed Protein Yields an Exceptionally Stable Homodimer: Implications for Protein Engineering and Evolution
Dantas G., Watters AL, Lunde BM, Eletr ZM, Isern NG, Roseman T, Lipfert J, Doniach S, Tompa M, Kuhlman B, Stoddard BL, Varani G, Baker D.**
J Mol Biol. 2006; 362: 1004 | [PDF]

High-Resolution Structural Validation of the Computational Redesign of Human U1A Protein
Dobson N, Dantas G, Baker D, Varani G.**
Structure. 2006; 14 (5): 847 | [PDF]

1H, 13C and 15N Resonance Assignments of URNDesign, a Computationally Redesigned RRM Protein
Dobson N, Dantas G, Varani G.**
J Biomol NMR. 2005; 33 (2): 135 | [PDF]

Predicting protein structures accurately
Bradley P, Kuhlman B, Dantas G, Baker D.**
Science. 2004; 304: 1597 | [PDF]

Design of a novel globular protein fold with atomic level accuracy
Kuhlman B*, Dantas G*, Ireton GC, Varani G, Stoddard BL, Baker D.**
Science. 2003; 302 (5649): 1364 | [PDF] [supplementary materials]

A Large Scale Test of Computational Protein Design: Folding and Stability of Nine Completely Redesigned Globular Proteins
Dantas G*, Kuhlman B*, Callender D, Wong M, Baker D.**
J Mol Biol. 2003; 332: 449 | [PDF]

Synthesis of polyazamacrocyclic compounds via modified Richman-Atkins cyclizations of beta-trimethylsilylethanesulfonamides
Hoye RC,** Richman JE, Dantas G, Lightbourne MF, Shinneman LS.
J Org Chem. 2001; 66: 2722 | [PDF]



[03]  Inhibition and Diagnostics of Emerging Tetracycline Resistance Enzymes. 
Tolia, J., Dantas, G., Wencewicz, T., Park, J., Gasparrini, A., Forsberg, K., Vogel, J.
U.S. Patent Application No. 62/354,404, filed 24 June, 2016.

Compositions and Methods of Use of Antibacterial Drug Combinations.
Dantas, G., Gonzales, P., Forsberg, K., Pesesky, M., Chang, M., Mobashery, S.
U.S. Patent Application No. 62/190,588, filed 9 July, 2015.

Assays and Other Reactions Involving Droplets.
Agresti, J., Chu, L., Weitz, D.A., Kim, J., Rowat, A., Sommer, M., Dantas, G., Church, G.
US Patent Application No. 12/529,926, filed 7 March, 2008.